Software Environments
The
wide variety of software currently present at the Bioinformatics
Resource Center, will be maintained, augmented when newer versions are
available as well as further enhanced when new capabilities are
required by any researcher supported by the PR-AABRE project.
Arrangements can be made if specific software currently not supported
on any of the BiRC computational platforms, is requested by any
PR-AABRE researcher. Please contact us with any request.
Currently, the principal software packages supported, where some training opportunities exist, are:
- EMBOSS and the wEMBOSS portal
- ESTAP
- NAMD & VMD
Other important bioinformatics software such as phylip and blast are also currently available.
In order to access these software, a new user will need to fill out a research allocation form available here.
We
actively support the OpenSource approach to bioinformatics software
development. The basic justification behind this approach is the
ability with OpenSource software to read, modify and redistribute the
source code for a piece of software, with the ability to actively
participate in the evolution of the software. This gives us th
eopportunity to develop new applications using existing pieces, or even
"tune" existing application to sustain the specific research needs of
PR-AABRE researchers.
Contacting us through the
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is the easiest way to request specific software or training.
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